indexamajig: Add --cpu-pinSimilar code was stripped out 3.5 years ago by
4f4e5d05269eee6b192c271f2f9730a1ad3a4fbd. However, it seems there are
still systems where it improves performance a lot.
Remove image_write() and image_hdf5_write()This code isn't needed any more, now that we don't simulate images. It
never worked very well - although we can read almost any sensible
format, writing images that match an arbitrary schema is very difficult.
See 41ed47a931e4c162c9a501981b6f19cd725f6e43 and https://gitlab.desy.de/thomas.white/crystfel/-/issues/81
Remove pattern_sim and partial_simUse of these programs has been following this pattern for several years:
1. Neglect
2. Once yearly attempt by someone to use either tool
3. Discovery that it's totally broken
4. Bug report and fast bug fix
5. Go to 1.
For more discussion, see the issue referenced below.
Closes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/81
Revert "Refuse to overwrite an existing stream"This was intended to help users avoid accidents. However, it seems to
trip people up a lot, and creates problems such as breaking Slurm job
pre-emption (re-scheduled job fails because output already exists).
This reverts commit 6db9619ba5172b9e416a5939d375f5119aa652ff.
process_hkl_check_4: Change temporary filenameThis test used "tempf.hkl", whereas process_hkl_check_1 used "tempF.hkl". This led to a race condition when running tests in parallel on an case-insensitive filesystem (Mac).
asdf: Restrict domain for search for peaks in frequency graphPreviously, it was possible for the search to run over the part of the
array initialised by FFTW.
Revert "Tutorial: update screenshot with new icons"This reverts commit 044560941c0aa28e1e809f148ce553e985b4e868.
Accidentally committed stuff that should not be there yet.
Thomas White
Thomas White